What is Pathogen Portal?

Pathogen Portal is a repository linking to the Bioinformatics Resource Centers (BRCs) sponsored by the National Institute of Allergy and Infectious Diseases (NIAID) and maintained by The Virginia Bioinformatics Institute. The BRCs are providing web-based resources to scientific community conducting basic and applied research on organisms considered potential agents of biowarfare or bioterrorism or causing emerging or re-emerging diseases

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EuPathDB

IRD

PATRIC

VectorBase

ViPR

RNA-Seq

19 Jan 2012

Use this Pipeline to:

Map your RNA-Seq Reads to Reference Genomes

Estimate Gene Expression Values

RNA-Seq Pipeline powered by

5 Feb 2012

5 Feb 2012

5 Feb 2012

17 Jun 2011

This project has been funded in whole or in part with Federal funds from the National Institute of Allergy and Infectious Diseases, National Institutes of Health, Department of Health and Human Services, under Contract No. HHSN272200900040C, awarded to BWS Sobral.

Contact the Pathogen Portal Team

Use this Pipeline to: Map your RNA-Seq Reads to Reference Genomes Estimate Gene Expression Values

Use this Pipeline to:

Map your RNA-Seq Reads to Reference Genomes

Estimate Gene Expression Values